PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_209.13
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family TCP
Protein Properties Length: 245aa    MW: 26578.4 Da    PI: 7.2571
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_209.13genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP111.89.6e-3523120289
                           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec...e 74 
                                   ++kkdrhski T++g++dRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++          se+   +
  evm.model.supercontig_209.13  23 TAKKDRHSKILTSKGPKDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSAIDKLNQLppqenH----SESpgyN 99 
                                   78**************************************************************533220....3332333 PP

                           TCP  75 aesssssasnsssg.........k 89 
                                   ++s  + +s    +         +
  evm.model.supercontig_209.13 100 PASTINFQS---YPqdiiistnpN 120
                                   333333333...222334443321 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.5E-312396IPR005333Transcription factor, TCP
PROSITE profilePS5136931.192583IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MGMKSNGGDN ILNFNGGNIL RSTAKKDRHS KILTSKGPKD RRVRLSAHTA IQFYDVQDRL  60
GYDRPSKAVD WLINKAKSAI DKLNQLPPQE NHSESPGYNP ASTINFQSYP QDIIISTNPN  120
RTQDLGLSLQ SFQNSPLNTS HISSTDQTQF LNSAPVGFVS NFQRSMVGWS STSPLPASQR  180
EIFGQGLTSF PQSGDDMPIG SAIVGTRYVS DGLPAFHFPF LIHGEEESGG VSDTPSSSPP  240
DSNH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007050038.14e-69TCP family transcription factor 4 isoform 1
RefseqXP_007050039.14e-69TCP family transcription factor 4 isoform 1
SwissprotO822777e-41TCP10_ARATH; Transcription factor TCP10
TrEMBLA0A061DQ624e-69A0A061DQ62_THECC; TCP family transcription factor 4 isoform 1
STRINGGLYMA13G36840.22e-64(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM141581924
Representative plantOGRP18015163
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.15e-42TCP domain protein 10